RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by FNR,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


FNR,+ Regulatory phrases      

FNR,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      feoAp
      cydDp
      arcAp1
      ompWp
      hcpp1
      iraMp1
      napFp1
      hlyEp
      uppp
      focAp3
      caiFp
      pdhRp
      pdhRp2
      aerp
      dcuBp1
      frdAp
      frdAp2
      fnrSp
      ydhYp
      adhEp2
      yhjAp
      yfgFp
      nirBp
      nrfAp
      ansBp2
      dmsAp1
      narGp
      aspAp
      nikAp1
      ynfEp
      grcAp1
      focAp1
      ynfEp2
      moaAp1
      caiTp
      narKp1
      nrdDp
      glpABCp
    ybdNp
    ravAp
    hypBp
    glpTQp
    fdnGp
    dcuCp
    fumBp
      ydeJp
      fixAp
      cydAp2
      cadCp
      fesp
      malPp
      tdcAp
      katGp


FNR,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [NagC,?,-128.0] [OmpR,+,-178.0] [Fur,-,-17.0] feoAp
  [NarL,+,-126.0] [NarL,+,-80.0] [ArcA,+,-44.0] cydDp
  arcAp1
  [FNR,-,-126.5] [ArcA,-,1.5] [NarL,-,-18.5] [CRP,-,-42.5] ompWp
  [NarP,+,-109.0,-100.0] [NarL,+,-100.0,-109.0] [NsrR,-,6.0] hcpp1
  [PhoP,+,-199.5] [ArcA,+,-170.5] [PhoP,+,-68.0] [ArcA,+,-16.5] iraMp1
  [ModE,+,-133.5] [NarP,+,-40.0,-49.0] [NarL,-,-40.0,-49.0] napFp1
  [Fis,-,-192.0,-110.0] [SlyA,+,-44.5,-55.5] [H-NS,-,-56.5,-6.0] [CRP,+,-61.5] [H-NS,+,-56.5,-6.0] [Fis,-,9.0,-63.0,19.0] [SlyA,+,52.5,61.5,76.5,90.5] hlyEp
  uppp
  [NarL,-,-25.0,-27.0] [NarL,-,221.0,96.0,36.0,285.0,69.0,87.0,302.0,170.0,52.0] focAp3
  [CRP,+,-41.5] caiFp
  [BtsR,-,-203.0,-188.0] [CRP,+,-377.5,-110.5] [Cra,-,-185.5] [PdhR,-,19.0] [CRP,+,-70.5,-62.5,-82.5,-50.5] [FNR,-,-50.5] pdhRp
  [BtsR,-,-203.0,-188.0] [CRP,+,-377.5,-110.5] [Cra,-,-185.5] [PdhR,-,19.0] [CRP,+,-50.5,-70.5,-82.5,-62.5] [FNR,-,-50.5] pdhRp2
  [CRP,+,-49.5] aerp
  [CRP,+,-106.5] [NarL,-,-109.0] [NarL,-,-45.0,19.0,2.0,24.0] [NarL,-,43.0] dcuBp1
  [DcuR,+,-104.0] [NarL,-,-4.0,6.0,-12.0,14.0,-26.0] frdAp
  [DcuR,+,-104.0] [NarL,-,-4.0,-26.0,-12.0,14.0] frdAp2
  fnrSp
  [NarP,-,6.0,15.0] [NarL,-,15.0,6.0,-16.0,-42.0] ydhYp
  [NarL,-,-24.0,-15.0] adhEp2
  [OxyR,+,-64.0,-86.0] yhjAp
  yfgFp
  [IHF,+,-115.0] [Fis,-,-142.0,-97.0] [CRP,-,-296.5] [NarP,+,-74.0,-65.0] [NarL,+,-65.0,-74.0] [Cra,-,-15.5] [IHF,-,-88.0] [Fis,-,23.0] [CRP,-,-41.5] nirBp
  [NsrR,-,-121.0] [IHF,+,-127.0] [NsrR,-,-63.0] [NarP,+,-79.0,-70.0] [NarL,+,-70.0,-79.0,-50.0] [IHF,-,-55.0] [NarL,-,-50.0,-22.0] [Fis,-,-15.0] nrfAp
  [CRP,+,-91.5] ansBp2
  [NarL,-,15.0,-7.0,-27.0] [Fis,-,8.0,-33.0] [Fis,-,59.0] dmsAp1
  [IHF,+,-125.0] [NarL,+,-185.0,-208.0,-195.0,-101.0] [RstA,+,-276.0] [Fis,-,-103.0] [NarL,+,-57.0,-79.0,-89.0,-71.0] [Fis,-,-66.0] narGp
  [DcuR,+,-161.0] [NarL,-,-112.0] [DcuR,+,-75.0] [CRP,+,-90.5] [NarL,-,-67.0,-76.0] aspAp
  [NikR,-,-12.5] nikAp1
  [NarL,-,-23.0,-14.0] ynfEp
  [Fis,+,-159.0,-117.0] [ArcA,+,-99.0] [FNR,-,-93.5] [PdhR,-,17.0] [CRP,+,-40.5] [Fis,+,-10.0] [ArcA,+,-82.0] [FNR,-,-40.5] grcAp1
  [IHF,+,-112.5] [ArcA,+,-251.0,-114.0] [NarL,-,-152.0,-226.0,-253.0,-270.0,-286.0,-101.0,-235.0,-346.0,-348.0] [CRP,+,-40.5] [ArcA,+,-6.0] [NarL,-,-20.0,-37.0] focAp1
  [NarL,-,-23.0,-14.0] ynfEp2
  [CueR,-,202.0] moaAp1
  [CaiF,+,-151.5,-227.5,-208.5,-170.5] [ArcA,+,-101.0] [CRP,+,-41.5] [ArcA,+,28.0,-91.0] [ArcA,+,50.0] caiTp
  [IHF,+,-130.0] [NarL,+,-177.0,-194.0,-98.0,-160.0,-214.0,-154.0,-103.0] [NarL,+,-90.0,-67.0,-80.0] [Fis,-,-43.0] narKp1
  [NrdR,-,-22.5,9.5] nrdDp
  [Fis,+,-180.0,-116.0] [CRP,+,-90.5,-40.5,-0.5] [Fis,+,-19.0,-61.0,-68.0] [GlpR,-,-18.5,1.5,-90.5,-50.5] [Fis,+,35.0] [GlpR,-,41.5] glpABCp
  [CysB,+,-177.5] [ArcA,+,64.5] ybdNp
  ravAp
  hypBp
  [CRP,+,-131.5] [Fis,+,-113.0,-166.0] [GlpR,-,-132.5,-172.5,-113.5] [CRP,+,-41.5,-91.5] [Fis,+,-71.0,-16.0,-64.0] [GlpR,-,-41.5,-81.5] [Fis,+,49.0] [GlpR,-,348.5,315.5,333.5] [IHF,-,202.0,35.0] glpTQp
  [NarL,+,-100.0,-124.0,-109.0] [NarP,-,-109.0,-100.0] [FNR,-,-97.5] [NarL,+,-77.0] fdnGp
  [ArcA,+,-340.0] dcuCp
  fumBp
  ydeJp
  [CaiF,+,-136.5,-117.5] [CRP,+,-126.5] [CaiF,+,-60.5,-79.5] [CRP,+,-69.5] fixAp
  [FNR,-,-115.5] [ArcA,+,-77.5] cydAp2
  [MlrA,+,-201.5] cadCp
  [Fur,-,-21.0,-9.0,-28.0,-15.0,-2.0] [H-NS,+,-0.5] fesp
  [MalT,+,-95.5] [MalT,+,-73.5,-37.5,-60.5] malPp
  [IHF,+,-103.0] [TdcR,+,-195.0] [TdcA,+,-177.0] [CRP,+,-43.5] tdcAp
  [OxyR,+,2.0,-66.0,-44.0] katGp

  

  

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