RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by GadW,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


GadW,- Regulatory phrases      

GadW,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      slpp
      gadWp2
      gadYp
    hdeAp
    hdeAp2
    gadAp
    gadAp2
      gadBp
      gadBp2


GadW,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [GadX,+,-60.5,-81.5,17.0,-3.0,-70.5] [YdeO,+,-40.0] [MarA,-,39.0] slpp
  [GadX,-,-96.5] [GadX,-,-32.5,-68.5,-53.5] [PhoP,+,-28.0] gadWp2
  [GadX,+,-29.5,-50.5] gadYp
  [GadX,+,-126.5] [GadW,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-159.0,-116.0,-97.0] [H-NS,-,-118.0] [GadX,+,-53.5,-74.5] [GadW,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-27.5,-51.5] [GadX,-,-74.5,-53.5] [MarA,-,-39.0] [Lrp,-,-64.0,-55.0,-18.0] [FliZ,-,8.0] [PhoP,+,-32.0] hdeAp
  [GadX,+,-126.5] [GadW,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-97.0,-159.0,-116.0] [H-NS,-,-118.0] [GadX,+,-53.5,-74.5] [GadW,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-51.5,-27.5] [GadX,-,-74.5,-53.5] [MarA,-,-39.0] [Lrp,-,-18.0,-55.0,-64.0] [FliZ,-,8.0] [PhoP,+,-32.0] hdeAp2
  [GadX,+,-121.5,-100.5] [Fis,-,-147.0,-94.0,-118.0] [GadW,+,-121.5,-100.5] [TorR,-,-122.5] [GadX,+,-10.5,-57.5,-31.5,-78.0] [Fis,-,-18.0] [GadW,+,-57.5,-78.0] [CRP,-,-62.5] [RcsB,-,-18.5] [FNR,-,11.5] [GadE-RcsB,+,-62.5] [TorR,-,73.5] gadAp
  [GadX,+,-121.5,-100.5] [Fis,-,-94.0,-118.0,-147.0] [GadW,+,-121.5,-100.5] [TorR,-,-122.5] [GadX,+,-10.5,-31.5,-78.0,-57.5] [Fis,-,-18.0] [GadW,+,-57.5,-78.0] [CRP,-,-62.5] [RcsB,-,-18.5] [FNR,-,11.5] [GadE-RcsB,+,-62.5] [TorR,-,73.5] gadAp2
  [GadX,+,-210.5,-184.0,-98.5,-119.5,-268.0,-231.5] [Fis,-,-105.0] [GadW,+,-231.5,-119.5,-210.5,-98.5] [GadX,+,-17.5,-39.5] [Fis,-,-59.0,-27.0] [CRP,-,-63.5] [GadE,+,-62.5] [RcsB,+,-64.5] [Fis,-,37.0] gadBp
  [GadX,+,-268.0,-231.5,-210.5,-184.0,-98.5,-119.5] [Fis,-,-105.0] [GadW,+,-98.5,-210.5,-231.5,-119.5] [GadX,+,-39.5,-17.5] [Fis,-,-27.0,-59.0] [CRP,-,-63.5] [GadE,+,-62.5] [RcsB,+,-64.5] [Fis,-,37.0] gadBp2

  

  

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