RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [NarL,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[NarL,+] Regulatory phrases      

[NarL,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [NarL,+,-74] [NarL,+,-65]   nirBp
    [NarL,+,-50] [NarL,+,-41]   ytfEp
    [NarL,+,-48] [NarL,+,-39]   yeaRp
    [NarL,+,-79] [NarL,+,-70] [NarL,+,-50]   nrfAp
    [NarL,+,-83] [NarL,+,-74] [NarL,+,-50] [NarL,+,-41]   ogtp
  [NarL,+,-126] [NarL,+,-80]   cydDp
  [NarL,+,-124] [NarL,+,-109] [NarL,+,-100] [NarL,+,-77]   fdnGp
  [NarL,+,-214] [NarL,+,-194] [NarL,+,-177] [NarL,+,-160] [NarL,+,-154] [NarL,+,-103] [NarL,+,-98] [NarL,+,-90] [NarL,+,-80] [NarL,+,-67]   narKp1
  [NarL,+,-208] [NarL,+,-195] [NarL,+,-185] [NarL,+,-101] [NarL,+,-89] [NarL,+,-79] [NarL,+,-71] [NarL,+,-57]   narGp
  [NarL,+,-122]     nuoAp2
  [NarL,+,-177] [NarL,+,-109]     moeAp
  [NarL,+,-109] [NarL,+,-100]     hcpp1


[NarL,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [Fis,-,-142.0,-97.0] [CRP,-,-296.5] [IHF,+,-115.0] [Fis,-,23.0] [CRP,-,-41.5] [IHF,-,-88.0] [NarP,+,-74.0,-65.0] [FNR,+,-41.5] [NarL,+,-65.0,-74.0] [Cra,-,-15.5] nirBp
  [NsrR,-,-12.0] [NarP,+,-41.0,-50.0] [NarL,+,-50.0,-41.0] ytfEp
  [Fis,-,-55.0,-31.0] [NsrR,-,-32.0] [NarP,+,-39.0,-48.0] [NarL,+,-48.0,-39.0] yeaRp
  [NsrR,-,-121.0] [IHF,+,-127.0] [Fis,-,-15.0] [NsrR,-,-63.0] [IHF,-,-55.0] [NarP,+,-79.0,-70.0] [FNR,+,-41.5] [NarL,-,-50.0,-22.0] [NarL,+,-70.0,-79.0,-50.0] nrfAp
  [Fis,-,-82.0] [NarL,+,-83.0,-50.0,-41.0,-74.0] ogtp
  [NarL,+,-126.0] [ArcA,+,-44.0] [FNR,+,-90.5] [NarL,+,-80.0] cydDp
  [NarP,-,-109.0,-100.0] [FNR,+,-97.5] [NarL,+,-100.0,-124.0,-109.0] [FNR,-,-97.5] [FNR,+,-42.5] [NarL,+,-77.0] fdnGp
  [IHF,+,-130.0] [NarL,+,-177.0,-194.0,-98.0,-160.0,-214.0,-154.0,-103.0] [Fis,-,-43.0] [FNR,+,-79.5,-41.5] [NarL,+,-90.0,-67.0,-80.0] narKp1
  [Fis,-,-103.0] [IHF,+,-125.0] [NarL,+,-185.0,-208.0,-195.0,-101.0] [RstA,+,-276.0] [Fis,-,-66.0] [FNR,+,-41.5] [NarL,+,-57.0,-79.0,-89.0,-71.0] narGp
  [ArcA,-,-108.0] [NarL,+,-122.0] [IHF,-,-83.0,-74.0,-66.0] [FNR,-,-40.5] nuoAp2
  [ArcA,+,-137.0] [NarL,+,-177.0,-109.0] [FNR,-,34.5] moeAp
  [NarP,+,-109.0,-100.0] [NarL,+,-100.0,-109.0] [NsrR,-,6.0] [FNR,+,-72.5] hcpp1

  

  

RegulonDB