RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by NagC,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


NagC,- Regulatory phrases      

NagC,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      ydePp
      dinIp
      creAp
      galPp
      ptsHp3
      ptsHp
      ptsHp4
      ptsHp5
      manXp
    nanCp
    chiZp
    ydeNp
    nagEp
    chbBp
    nagBp
    glmUp2


NagC,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [EvgA,+,-74.5] [PhoP,-,34.5] ydePp
  [LexA,-,-7.5] dinIp
  creAp
  [GalR,-,-207.5,-243.5,-107.5,-178.5] [GalS,-,-207.5,-107.5,-243.5,-178.5] [GalR,-,-61.5] [GalS,-,-61.5] [CRP,+,-42.5] [GalR,-,136.5] [GalS,-,136.5] galPp
  ptsHp3
  [Mlc,-,13.0] [CRP,+,-63.5] ptsHp
  [Mlc,-,13.0] [CRP,+,-63.5] ptsHp4
  [CRP,+,-60.5] ptsHp5
  [Mlc,-,-13.0,-79.0] [CRP,+,-92.5,-40.5] [Cra,-,40.5] manXp
  [NanR,-,-11.5,6.5,-2.5] [CRP,+,-61.5] nanCp
  [CRP,+,-70.5] chiZp
  [GadX,-,-233.5] [GadX,-,-69.0] ydeNp
  [CRP,-,-27.5,-61.5] [CRP,+,-27.5,-61.5] nagEp
  [ChbR,+,-38.0,-61.0] [ChbR,-,-38.0,-61.0] [CRP,+,-83.5] chbBp
  [CRP,-,-104.5] [CRP,+,-104.5] [CRP,-,-70.5] [CRP,+,-70.5] nagBp
  glmUp2

  

  

RegulonDB