RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by NarL,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


NarL,- Regulatory phrases      

NarL,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      ompWp
      dpiBp1
      dpiBp2
      norVp
      nrfAp
      napFp1
      napFp2
      dcuSp
      adhEp2
      ynfEp2
      ynfEp
      hyaAp2
      hyaAp
      hybOp1
      dmsAp1
      ydhYp
      frdAp
      frdAp2
    aspAp
    focAp1
    focAp3
  dcuBp1
      citCp2
      adhEp1
      adhEp


NarL,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [FNR,-,-126.5] [ArcA,-,1.5] [CRP,-,-42.5] [FNR,+,-81.5] ompWp
  [ArcA,+,-95.5] [CRP,-,45.5] [DpiA,+,104.0,146.0,77.0] [FNR,-,45.5] dpiBp1
  [DcuR,+,-98.0] [DcuR,+,-37.0] dpiBp2
  [NorR,+,-132.0,-111.0] [FNR,-,-140.5] [IHF,+,-48.0] [IHF,-,17.0] [NarP,-,-69.0,-78.0] [NorR,+,-87.0] norVp
  [NsrR,-,-121.0] [IHF,+,-127.0] [NsrR,-,-63.0] [IHF,-,-55.0] [NarP,+,-79.0,-70.0] [NarL,+,-70.0,-79.0,-50.0] [Fis,-,-15.0] [FNR,+,-41.5] nrfAp
  [ModE,+,-133.5] [NarP,+,-40.0,-49.0] [FNR,+,-64.5] napFp1
  [ModE,+,-130.5] [NarP,-,-37.0,-46.0] napFp2
  dcuSp
  [FNR,+,-42.5] adhEp2
  [FNR,+,-40.5] ynfEp2
  [FNR,+,-40.5] ynfEp
  [IscR,-,-39.0,-42.0] [YdeO,+,-61.0] [ArcA,+,-67.0,-7.5] [NarP,-,-10.0,7.0] [Fis,-,-21.0] hyaAp2
  [IscR,-,-39.0,-42.0] [YdeO,+,-61.0] [ArcA,+,-67.0,-7.5] [NarP,-,7.0,-10.0] [Fis,-,-21.0] hyaAp
  [ArcA,-,-57.0] hybOp1
  [Fis,-,8.0,-33.0] [FNR,+,-41.5] [Fis,-,59.0] dmsAp1
  [NarP,-,6.0,15.0] [FNR,+,-42.5] ydhYp
  [DcuR,+,-104.0] [FNR,+,-45.5] frdAp
  [DcuR,+,-104.0] [FNR,+,-45.5] frdAp2
  [DcuR,+,-161.0] [DcuR,+,-75.0] [CRP,+,-90.5] [FNR,+,-40.5] aspAp
  [ArcA,+,-251.0,-114.0] [IHF,+,-112.5] [ArcA,+,-6.0] [CRP,+,-40.5] [FNR,+,-40.5] focAp1
  [FNR,+,-58.5] focAp3
  [CRP,+,-106.5] [FNR,+,-45.5] dcuBp1
  [CRP,-,11.5] [DpiA,+,-21.0,-90.0,-48.0] [FNR,-,11.5] citCp2
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-65.0,-6.0] [Fis,+,-42.0,-68.0] [Cra,-,36.5] adhEp1
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-6.0,-65.0] [Fis,+,-68.0,-42.0] [Cra,-,36.5] adhEp

  

  

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