RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by CytR,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


CytR,- Regulatory phrases      

CytR,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      ycdZp4
      ppiAp2
      cddp
      rpoHp5
      rpoHp4
      rpoHp3
      ppiAp3
      ppiAp4
      deoCp2
      udpP
      nupGp
      tsxp2
      cytRp


CytR,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [CRP,-,4.0,-48.0] [CRP,+,-48.0,4.0] ycdZp4
  [CRP,-,-95.5] [CRP,-,-42.5] [CRP,+,-42.5] ppiAp2
  [CRP,-,-94.5] [CRP,-,-42.5] [NsrR,-,9.0] [CRP,+,-42.5,-92.5] cddp
  [CRP,-,-94.5] [CRP,+,-94.5] [CRP,-,-41.5] [CRP,+,-41.5,-48.5] rpoHp5
  [CRP,-,-27.5,-80.5] [DnaA,-,-55.0,-31.0] rpoHp4
  [CRP,-,-73.5,-20.5] [DnaA,-,-48.0] rpoHp3
  [CRP,-,-60.5,-7.5] [CRP,+,-60.5] ppiAp3
  [CRP,-,12.5] ppiAp4
  [CRP,-,-93.5] [DeoR,-,-308.0,-887.0] [CRP,+,-93.5] [Fis,+,-102.0] [DeoR,-,-8.0] [ModE,-,-35.0] [CRP,+,-40.5] deoCp2
  [CRP,-,-93.5] [CRP,+,-93.5] [CRP,+,-41.5] udpP
  [CRP,-,-40.5,-92.5] [CRP,+,-42.5,-92.5] [CRP,-,56.5] [CRP,+,56.5] nupGp
  [CRP,-,-73.5,-40.5] [CRP,+,-73.5,-40.5] tsxp2
  [CRP,-,-64.5] [CRP,+,-64.5] cytRp

  

  

RegulonDB