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Synonyms: MalT-maltotriose-ADP, MalT, MalT-Aes, MalT-MalK, MalT-MalY, MalT-maltotriose-ATP |
Summary:
The "Maltose regulator," MalT, is a transcription factor that activates transcription of several genes and operons involved in maltose catabolism and transport [9, 11, 13, 14, 15]. This regulator is sensitive to catabolite control and is induced when Escherichia coli is grown on maltodextrin in the absence of glucose [16, 17, 18]. MalT is a STAND transcription factor, Signal Transduction ATP bases with numerous domains [19, 20]. A novel regulatory role for the MalT regulon in glycolysis-associated utilization of carbon sources has been identified [21]. MalT is monomeric in solution, but in the presence of maltodextrin and ATP it forms multiple complexes (oligomers) in its target promoters and activates transcription by overlapping the -35 box of promoters [11, 13]. Read more > |
Transcription factor | ![]() ![]() |
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TF conformation(s): |
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Evolutionary Family: | LuxR/UhpA | |||||||||||||||||||||||||||||||||||||||||||||||||
TFBs length: | 10 | |||||||||||||||||||||||||||||||||||||||||||||||||
Sensing class: | Using internal synthesized signals | |||||||||||||||||||||||||||||||||||||||||||||||||
Connectivity class: | Local Regulator | |||||||||||||||||||||||||||||||||||||||||||||||||
Gene name: | malT | |||||||||||||||||||||||||||||||||||||||||||||||||
Genome position: | 3553085-3555790 | |||||||||||||||||||||||||||||||||||||||||||||||||
Length: | 2706 bp / 901 aa | |||||||||||||||||||||||||||||||||||||||||||||||||
Operon name: | malT | |||||||||||||||||||||||||||||||||||||||||||||||||
TU(s) encoding the TF: |
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Regulon |
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Regulated gene(s) | lamB, malE, malF, malG, malH, malK, malM, malP, malQ, malS, malZ | ||||||
Multifun term(s) of regulated gene(s) |
MultiFun Term (List of genes associated to the multifun term)
carbon compounds (8)
polysaccharides (4)
ABC superfamily, membrane component (2)
membrane (2)
Beta barrel porins (The Outer Membrane Porin (OMP) Functional Superfamily) (1)
Read more >
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Regulated operon(s) | malEFGH, malK-lamB-malM, malPQ, malS, malZ | ||||||
First gene in the operon(s) | malE, malK, malP, malS, malZ | ||||||
Simple and complex regulons | CRP,CreB,Fis,H-NS,MalT,StpA CRP,MalT CRP,MalT,PhoP FNR,MalT MalT | ||||||
Simple and complex regulatory phrases | Regulatory phrase (List of promoters regulated by the phrase) |
Transcription factor regulation |
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Functional conformation | Function | Promoter | Sigma factor | Central Rel-Pos | Distance to first Gene | Genes | Sequence![]() |
LeftPos | RightPos | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | References | |
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MalT-maltotriose-ATP | activator | malEp | Sigma70 | -231.5 | -276.5 | malE, malF, malG, malH |
tggcttaaatCCTCCACCCCctggcttttt
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4246691 | 4246700 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [4], [5], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malEp | Sigma70 | -207.5 | -252.5 | malE, malF, malG, malH |
cttttttatgGGGGAGGAGGcgggaggatg
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4246667 | 4246676 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [4], [5], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malEp | Sigma70 | -197.5 | -242.5 | malE, malF, malG, malH |
ggggaggaggCGGGAGGATGagaacacggc
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4246657 | 4246666 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [5], [5], [6], [7], [7], [8], [8] | |
MalT-maltotriose-ATP | activator | malEp | Sigma70 | -51.5 | -96.5 | malE, malF, malG, malH |
aagcgacggtGGGGCGTAGGggcaaggagg
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4246511 | 4246520 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [4], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malEp | Sigma70 | -41.5 | -86.5 | malE, malF, malG, malH |
ggggcgtaggGGCAAGGAGGatggaaagag
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4246501 | 4246510 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [5], [5], [6], [7], [7], [8], [8] | |
MalT-maltotriose-ATP | activator | malKp | Sigma70 | -230.5 | -278.5 | malK, lamB, malM |
ctctttccatCCTCCTTGCCcctacgcccc
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4246501 | 4246510 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [4], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malKp | Sigma70 | -220.5 | -268.5 | malK, lamB, malM |
cctccttgccCCTACGCCCCaccgtcgctt
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4246511 | 4246520 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [4], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malKp | Sigma70 | -74.5 | -122.5 | malK, lamB, malM |
gccgtgttctCATCCTCCCGcctcctcccc
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4246657 | 4246666 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malKp | Sigma70 | -64.5 | -112.5 | malK, lamB, malM |
catcctcccgCCTCCTCCCCcataaaaaag
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4246667 | 4246676 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malKp | Sigma70 | -40.5 | -88.5 | malK, lamB, malM |
aaaaagccagGGGGTGGAGGatttaagcca
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4246691 | 4246700 | [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [4], [4], [5], [6], [7], [8] | |
MalT-maltotriose-ATP | activator | malPp | Sigma70 | -95.5 | -132.5 | malP, malQ |
actagctttaAGTGGTTGAGAtcacatttcc
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3552601 | 3552611 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | S | [6], [9] | |
MalT-maltotriose-ATP | activator | malPp | Sigma70 | -73.5 | -110.5 | malP, malQ |
cacatttcctTGCTCATCCCCgcaactcctc
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3552579 | 3552589 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | S | [1], [6], [9], [9] | |
MalT-maltotriose-ATP | activator | malPp | Sigma70 | -60.5 | -97.5 | malP, malQ |
tcatccccgcAACTCCTCCCTgcctaatccc
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3552566 | 3552576 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [1], [6], [9], [9], [10] | |
MalT-maltotriose-ATP | activator | malPp | Sigma70 | -37.5 | -74.5 | malP, malQ |
ctaatcccccGCAGGATGAGGaaggtcaaca
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3552543 | 3552553 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] | C | [1], [6], [9], [9], [10] | |
MalT-maltotriose-ATP | activator | malSp | Sigma70 | -74.5 | -101.5 | malS |
gcgcgagatcGCTCACCCTTgcttctcatc
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3737391 | 3737400 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [11] | |
MalT-maltotriose-ATP | activator | malSp | Sigma70 | -61.5 | -88.5 | malS |
cacccttgctTCTCATCCTGtggacttacc
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3737404 | 3737413 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [11] | |
MalT-maltotriose-ATP | activator | malSp | Sigma70 | -37.5 | -64.5 | malS |
cttaccgctcAGGGATGAGTtttgtttggc
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3737428 | 3737437 | [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS] | W | [11], [12] | |
MalT-maltotriose-ATP | activator | malZp | nd | -73.5 | -96.5 | malZ |
ttccgaaagtTATCCGCCCCcgtcctcctc
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422417 | 422426 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [13] | |
MalT-maltotriose-ATP | activator | malZp | nd | -60.5 | -83.5 | malZ |
ccgcccccgtCCTCCTCCCCcaaatatcct
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422430 | 422439 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [13] | |
MalT-maltotriose-ATP | activator | malZp | nd | -37.5 | -60.5 | malZ |
atatccttcaGATGATGAGTgatcctgcat
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422453 | 422462 | [COMP-AINF-SIMILAR-TO-CONSENSUS] | W | [13], [13] |
Alignment and PSSM for MalT TFBSs | ![]() |
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Aligned TFBS of MalT |
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Sequence | |
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GGGGAGGAG | |
GGGGAGGAG | |
GGGGATGAG | |
GAGGATGAG | |
AGGGAGGAG | |
AGGGATGAG | |
GGGGTGGAG | |
CAGGATGAG | |
CAGGATGAG | |
GGGGCGGAT | |
GATGATGAG | |
AAGGGTGAG | |
AAGGAGGAT | |
GGGGCGTAG | |
GTGGTTGAG |
Position weight matrix (PWM). MalT matrix-quality result |
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A 4 6 0 0 10 0 0 15 0 C 2 0 0 0 2 0 0 0 0 G 9 8 14 15 1 7 14 0 13 T 0 1 1 0 2 8 1 0 2 |
Consensus |
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; consensus.strict GgGGagGAG ; consensus.strict.rc CTCCTCCCC ; consensus.IUPAC GrGGakGAG ; consensus.IUPAC.rc CTCMTCCYC ; consensus.regexp G[ag]GGa[gt]GAG ; consensus.regexp.rc CTC[AC]TCC[CT]C |
Evolutionary conservation of regulatory elements | ![]() |
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Reference(s) |
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